Select transcription factors (TF) for use in custom regulome. (N.B. Only human hg18 assembly supported).

Select TF binding dataset

Select TF by

Select PWMs Check all Uncheck all
B$CRP_C
F$STRE_01
P$GBP_Q6
V$ACAAT_B
V$AFP1_Q6
V$AHRARNT_01
V$AHRARNT_02
V$AHRHIF_Q6
V$AHR_Q5
V$AIRE_01
V$AIRE_02
V$ALPHACP1_01
V$ALX4_01
V$AMEF2_Q6
V$AML1_01
V$AML1_Q6
V$AML_Q6
V$AP1FJ_Q2
V$AP1_01
V$AP1_C
V$AP1_Q2
V$AP1_Q2_01
V$AP1_Q4
V$AP1_Q4_01
V$AP1_Q6
V$AP1_Q6_01
V$AP2ALPHA_01
V$AP2ALPHA_02
V$AP2ALPHA_03
V$AP2GAMMA_01
V$AP2REP_01
V$AP2_Q3
V$AP2_Q6
V$AP2_Q6_01
V$AP3_Q6
V$AP4_01
V$AP4_Q5
V$AP4_Q6
V$AP4_Q6_01
V$AREB6_01
V$AREB6_02
V$AREB6_03
V$AREB6_04
V$ARNT_01
V$ARNT_02
V$AR_01
V$AR_Q2
V$AR_Q6
V$ATF1_Q6
V$ATF3_Q6
V$ATF4_Q2
V$ATF6_01
V$ATF_01
V$ATF_B
V$BACH1_01
V$BACH2_01
V$BLIMP1_Q6
V$BRCA_01
V$BRN2_01
V$CAAT_C
V$CACCCBINDINGFACTOR_Q6
V$CAP_01
V$CART1_01
V$CDC5_01
V$CDPCR1_01
V$CDPCR3HD_01
V$CDPCR3_01
V$CDP_01
V$CDP_02
V$CDX_Q5
V$CEBPA_01
V$CEBPB_01
V$CEBPB_02
V$CEBPDELTA_Q6
V$CEBPGAMMA_Q6
V$CEBP_01
V$CEBP_Q2
V$CEBP_Q2_01
V$CEBP_Q3
V$CHOP_01
V$CHX10_01
V$CLOCKBMAL_Q6
V$COUPTF_Q6
V$COUP_01
V$COUP_DR1_Q6
V$CP2_02
V$CREBATF_Q6
V$CREBP1CJUN_01
V$CREBP1_01
V$CREBP1_Q2
V$CREB_01
V$CREB_02
V$CREB_Q2
V$CREB_Q2_01
V$CREB_Q3
V$CREB_Q4
V$CREB_Q4_01
V$CREL_01
V$CRX_Q4
V$DBP_Q6
V$DEC_Q1
V$DR1_Q3
V$DR3_Q4
V$DR4_Q2
V$E12_Q6
V$E2A_Q2
V$E2A_Q6
V$E2F1DP1RB_01
V$E2F1DP1_01
V$E2F1DP2_01
V$E2F1_Q3
V$E2F1_Q3_01
V$E2F1_Q4_01
V$E2F1_Q6
V$E2F1_Q6_01
V$E2F4DP1_01
V$E2F4DP2_01
V$E2F_01
V$E2F_02
V$E2F_03
V$E2F_Q2
V$E2F_Q3
V$E2F_Q3_01
V$E2F_Q4
V$E2F_Q4_01
V$E2F_Q6
V$E2F_Q6_01
V$E47_01
V$E47_02
V$E4BP4_01
V$E4F1_Q6
V$EBOX_Q6_01
V$EFC_Q6
V$EGR1_01
V$EGR2_01
V$EGR3_01
V$EGR_Q6
V$ELF1_Q6
V$ELK1_01
V$ELK1_02
V$ERR1_Q2
V$ER_Q6
V$ER_Q6_02
V$ETF_Q6
V$ETS1_B
V$ETS2_B
V$ETS_Q4
V$ETS_Q6
V$FAC1_01
V$FOXD3_01
V$FOXJ2_01
V$FOXJ2_02
V$FOXO1_01
V$FOXO1_02
V$FOXO3A_Q1
V$FOXO3_01
V$FOXO4_01
V$FOXO4_02
V$FOXP3_Q4
V$FOX_Q2
V$FREAC2_01
V$FREAC3_01
V$FREAC4_01
V$FREAC7_01
V$FXR_IR1_Q6
V$FXR_Q3
V$GABP_B
V$GATA1_02
V$GATA1_03
V$GATA1_04
V$GATA1_05
V$GATA2_01
V$GATA3_01
V$GATA4_Q3
V$GATA6_01
V$GATA_Q6
V$GCM_Q2
V$GCNF_01
V$GFI1_Q6
V$GLI_Q2
V$GRE_C
V$GR_01
V$GR_Q6
V$GR_Q6_01
V$HAND1E47_01
V$HEB_Q6
V$HES1_Q2
V$HFH3_01
V$HFH4_01
V$HIC1_02
V$HIC1_03
V$HIF1_Q3
V$HIF1_Q5
V$HLF_01
V$HMEF2_Q6
V$HMGIY_Q3
V$HMGIY_Q6
V$HNF1_01
V$HNF1_C
V$HNF1_Q6
V$HNF1_Q6_01
V$HNF3ALPHA_Q6
V$HNF3_Q6
V$HNF3_Q6_01
V$HNF4ALPHA_Q6
V$HNF4_01
V$HNF4_DR1_Q3
V$HNF4_Q6
V$HNF4_Q6_01
V$HNF4_Q6_02
V$HNF4_Q6_03
V$HNF6_Q6
V$HOXA4_Q2
V$HOXA7_01
V$HSF1_01
V$HSF1_Q6
V$HSF2_01
V$HSF_Q6
V$ICSBP_Q6
V$IPF1_Q4
V$IPF1_Q4_01
V$IRF1_01
V$IRF1_Q6
V$IRF7_01
V$IRF_Q6
V$IRF_Q6_01
V$ISRE_01
V$KROX_Q6
V$LBP1_Q6
V$LEF1TCF1_Q4
V$LEF1_Q2
V$LEF1_Q2_01
V$LFA1_Q6
V$LHX3_01
V$LMO2COM_01
V$LMO2COM_02
V$LRF_Q2
V$LRH1_Q5
V$LUN1_01
V$LXR_DR4_Q3
V$LXR_Q3
V$MAF_Q6_01
V$MAX_01
V$MAZR_01
V$MAZ_Q6
V$MEF2_01
V$MEF2_02
V$MEF2_03
V$MEF2_04
V$MEF2_Q6_01
V$MEIS1AHOXA9_01
V$MEIS1BHOXA9_02
V$MEIS1_01
V$MIF1_01
V$MINI19_B
V$MRF2_01
V$MTF1_Q4
V$MYB_Q3
V$MYB_Q5_01
V$MYCMAX_01
V$MYCMAX_02
V$MYCMAX_03
V$MYC_Q2
V$MYOD_Q6
V$MYOD_Q6_01
V$MYOGNF1_01
V$MZF1_01
V$MZF1_02
V$NCX_01
V$NERF_Q2
V$NF1_Q6
V$NF1_Q6_01
V$NFAT_Q4_01
V$NFAT_Q6
V$NFE2_01
V$NFKAPPAB50_01
V$NFKAPPAB65_01
V$NFKAPPAB_01
V$NFKB_C
V$NFKB_Q6
V$NFKB_Q6_01
V$NFMUE1_Q6
V$NFY_01
V$NFY_C
V$NFY_Q6
V$NFY_Q6_01
V$NKX22_01
V$NKX25_Q5
V$NKX3A_01
V$NKX61_01
V$NKX62_Q2
V$NRF1_Q6
V$NRF2_Q4
V$NRSF_Q4
V$OCT1_01
V$OCT1_02
V$OCT1_03
V$OCT1_04
V$OCT1_05
V$OCT1_06
V$OCT1_07
V$OCT1_B
V$OCT1_Q5_01
V$OCT1_Q6
V$OCT_C
V$OCT_Q6
V$OSF2_Q6
V$OTX_Q1
V$P300_01
V$P53_01
V$P53_02
V$P53_DECAMER_Q2
V$PAX1_B
V$PAX2_01
V$PAX2_02
V$PAX3_B
V$PAX5_01
V$PAX5_02
V$PAX6_01
V$PAX6_Q2
V$PAX8_01
V$PAX8_B
V$PAX_Q6
V$PBX1_01
V$PBX1_02
V$PBX1_03
V$PBX_Q3
V$PEA3_Q6
V$PEBP_Q6
V$PIT1_Q6
V$PITX2_Q2
V$PLZF_02
V$POU1F1_Q6
V$POU3F2_01
V$POU3F2_02
V$PPARA_02
V$PPARG_01
V$PPARG_02
V$PPARG_03
V$PPAR_DR1_Q2
V$PR_01
V$PR_02
V$PR_Q2
V$PU1_Q6
V$PXRRXR_01
V$PXRRXR_02
V$PXR_Q2
V$RBPJK_Q4
V$RFX1_01
V$RFX1_02
V$RFX_Q6
V$RORA1_01
V$RORA2_01
V$RORA_Q4
V$RP58_01
V$RREB1_01
V$RSRFC4_01
V$RSRFC4_Q2
V$SF1_Q6
V$SF1_Q6_01
V$SMAD3_Q6
V$SMAD4_Q6
V$SMAD_Q6
V$SMAD_Q6_01
V$SOX10_Q6
V$SOX9_B1
V$SOX_Q6
V$SP1_01
V$SP1_Q2_01
V$SP1_Q4_01
V$SP1_Q6
V$SP1_Q6_01
V$SP3_Q3
V$SREBP1_01
V$SREBP1_02
V$SREBP_Q3
V$SRF_01
V$SRF_C
V$SRF_Q4
V$SRF_Q5_01
V$SRF_Q5_02
V$SRF_Q6
V$SRY_01
V$SRY_02
V$STAT1_01
V$STAT1_02
V$STAT1_03
V$STAT3_01
V$STAT3_02
V$STAT4_01
V$STAT5A_01
V$STAT5A_02
V$STAT5A_03
V$STAT5A_04
V$STAT5B_01
V$STAT6_01
V$STAT6_02
V$STAT_01
V$STAT_Q6
V$SZF11_01
V$T3R_Q6
V$TAACC_B
V$TAL1ALPHAE47_01
V$TAL1BETAE47_01
V$TAL1BETAITF2_01
V$TAL1_Q6
V$TATA_01
V$TATA_C
V$TAXCREB_01
V$TAXCREB_02
V$TBP_01
V$TBP_Q6
V$TBX5_01
V$TBX5_02
V$TBX5_Q5
V$TCF11MAFG_01
V$TCF11_01
V$TCF4_Q5
V$TEF1_Q6
V$TEF_Q6
V$TEL2_Q6
V$TFE_Q6
V$TFIIA_Q6
V$TFIII_Q6
V$TGIF_01
V$TITF1_Q3
V$TST1_01
V$TTF1_Q6
V$USF2_Q6
V$USF_01
V$USF_02
V$USF_C
V$USF_Q6
V$USF_Q6_01
V$VDR_Q3
V$VDR_Q6
V$WT1_Q6
V$XBP1_01
V$YY1_01
V$YY1_02
V$YY1_Q6
V$YY1_Q6_02
V$ZBRK1_01
V$ZIC2_01
V$ZID_01
V$ZNF219_01

* To update the refined pwm selection list, select "Use all" andt then "Refine" under "Refine selection of PWMs".